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A Bayesian Perspective on the Reproducibility Project: Psychology

A Bayesian Perspective on the Reproducibility Project: Psychology

We revisit the results of the recent Reproducibility Project: Psychology by the Open Science Collaboration. We compute Bayes factors—a quantity that can be used to express comparative evidence for an hypothesis but also for the null hypothesis—for a large subset ( N = 72) of the original papers and their corresponding replication attempts. In our computation, we take into account the likely scenario that publication bias had distorted the originally published results. Overall, 75% of studies gave qualitatively similar results in terms of the amount of evidence provided. However, the evidence was often weak (i.e., Bayes factor < 10). The majority of the studies (64%) did not provide strong evidence for either the null or the alternative hypothesis in either the original or the replication, and no replication attempts provided strong evidence in favor of the null. In all cases where the original paper provided strong evidence but the replication did not (15%), the sample size in the replication was smaller than the original. Where the replication provided strong evidence but the original did not (10%), the replication sample size was larger. We conclude that the apparent failure of the Reproducibility Project to replicate many target effects can be adequately explained by overestimation of effect sizes (or overestimation of evidence against the null hypothesis) due to small sample sizes and publication bias in the psychological literature. We further conclude that traditional sample sizes are insufficient and that a more widespread adoption of Bayesian methods is desirable.

If you fail to reproduce another scientist's results, this journal wants to know

If you fail to reproduce another scientist's results, this journal wants to know

The biotech company Amgen Inc. and prominent biochemist Bruce Alberts have created a new online journal that aims to lift the curtain on often hidden results in biomedicine: failed efforts to confirm other groups' published papers.

Unexpected, a video by the Royal Society

Unexpected, a video by the Royal Society

Fellow of the Royal Society and future President of the Royal Statistical Society, Sir David Spiegelhalter visits Dr Nicole Janz to discuss reproducibility in scientific publications.

rOpenSci announces $2.9M award from the Helmsley Charitable Trust

rOpenSci announces $2.9M award from the Helmsley Charitable Trust

rOpenSci, whose mission is to develop and maintain sustainable software tools that allow researchers to access, visualize, document, and publish open data on the Web, has been awarded a grant of nearly $2.9 million over 3 years from The Helmsley Charitable Trust.

Using prediction markets to estimate the reproducibility of scientific research

Using prediction markets to estimate the reproducibility of scientific research

Though there are currently no mechanisms in place to quickly identify findings that are unlikely to replicate, this paper shows that prediction markets are well suited to bridge this gap.

Scientists can draw very different meanings from the same data, study shows

Scientists can draw very different meanings from the same data, study shows

Giving the same information to multiple scientific teams can lead to very different conclusions, a report published today in Nature shows.

Most research spending is wasted on bad studies. These billionaires want to change that.

Most research spending is wasted on bad studies. These billionaires want to change that.

Laura and John Arnold, a Houston couple, have become the Medicis for "research integrity". They finance the Center of Open Science (COS) and the METRICS Institute led by J.P. Ioannidis at Stanford.

How scientists fool themselves and how they can stop

How scientists fool themselves and how they can stop

Humans are remarkably good at self-deception. But growing concern about reproducibility is driving many researchers to seek ways to fight their own worst instincts.

The ReScience Journal

The ReScience Journal

ReScience is a peer-reviewed journal that targets computational research and encourages the explicit replication of already published research, promoting new and open-source implementations in order to ensure that the original research is reproducible.

Half of biomedical research studies don't stand up to scrutiny and what we need to do about that

Half of biomedical research studies don't stand up to scrutiny and what we need to do about that

What if I told you that half of the studies published in scientific journals today - the ones upon which news coverage of medical advances is often based - won't hold up under scrutiny?

Experimental reproducibility has always been hard but cooperation could make it easier

Experimental reproducibility has always been hard but cooperation could make it easier

Is public money being thrown away on scientific research whose results won’t hold up to scrutiny?